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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs9875401 chr3:106797981 C/T C6orf89 chr6:36839646-36896740:+ -0.64 -7.11 2.14E-10 Box Plot
THYM rs988060 chr16:62988074 A/G TFF2 chr21:43766466-43771237:- -0.58 -7.27 9.85E-11 Box Plot
THYM rs9885210 chr5:176569188 T/C LOC388955 chr2:63849182-63850159:- -0.57 -7.74 1.07E-11 Box Plot
THYM rs9896243 chr17:44826056 C/G LOC644172 chr17:43677491-43679748:- 1.06 11.32 2.61E-19 Box Plot
THYM rs9896243 chr17:44826056 C/G LRRC37A4 chr17:43578685-43595516:- -0.55 -8.62 1.46E-13 Box Plot
THYM rs9946853 chr18:10882595 T/A CT45A4 chrX:134928331-134953994:- 0.61 7.67 1.51E-11 Box Plot
THYM rs9948841 chr18:69321293 C/T CSPG5 chr3:47603729-47622282:- -0.61 -7.31 8.49E-11 Box Plot
THYM rs9949707 chr18:69321855 G/A CSPG5 chr3:47603729-47622282:- 0.6 7.12 2.03E-10 Box Plot
THYM rs9952219 chr18:69322416 A/G CSPG5 chr3:47603729-47622282:- 0.6 7.12 2.03E-10 Box Plot
THYM rs9957687 chr18:10882559 C/G CT45A4 chrX:134928331-134953994:- 0.61 7.67 1.51E-11 Box Plot
THYM rs9962256 chr18:10920219 T/C CT45A4 chrX:134928331-134953994:- 0.55 7.09 2.4E-10 Box Plot
UCEC rs1021372 chr6:26632444 T/C ZNF322B chr9:99957633-99961910:- 0.67 7.41 8.37E-12 Box Plot
UCEC rs1021373 chr6:26632457 G/A ZNF322B chr9:99957633-99961910:- 0.67 7.41 8.37E-12 Box Plot
UCEC rs1027204 chr6:26639613 T/C ZNF322B chr9:99957633-99961910:- 0.67 7.41 8.37E-12 Box Plot
UCEC rs10563042 chr22:23647300 TAAA/T POM121L10P chr22:25053448-25054732:- 0.66 7.81 8.85E-13 Box Plot